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Publications

 

2012

Gerlach JQ, Kilcoyne M, Farrell MP, Kane M, Joshi L., "Differential release of high mannose structural isoforms by fungal and bacterial endo-B-N-acetylglucosaminidases ", Mol Biosyst. 2012, Vol 8, Issue 5, pages 1472-1481

Kilcoyne M, Gerlach JQ, Gough R, Gallagher ME, Kane M, Carrington SD, Joshi L., "Construction of a natural mucin microarray and interrogation for biologically relevant glyco-epitopes", Anal Chem. 2012 Mar 5. Vol 84, Issue 7, pages 3330-3338.

Lane JA, Mariño K, Rudd PM, Carrington SD and Hickey RM, "Methodologies for screening of bacteria-carbohydrate interactions: anti-adhesive milk oligosaccharides as a case study", International Journal of Food Microbiology. 2012, Vol 157 Issue 7 Pages 53-59

Lane JA, Mariño K, Naughton J, Kavanaugh D, Clyne M, Carrington SD, and Hickey RM, "Anti-infective bovine colostrum oligosaccharides: Campylobacter jejuni as a case study", International Journal of Food Microbiology, Vol 157, Issue 2, pages 182-199

André S, Jarikote DV, Yan D, Vincenz L, Wang GN, Kaltner H, Murphy PV and Gabius HJ, "Synthesis of bivalent lactosides and their activity as sensors for differences between lectins in inter- and intra-family comparisons", Bioorganic & Medicinal Chemistry Letters, 2012, Vol 22, pages 313-318

Wang GN, André S, Gabius HJ, Murphy PV, "Bi- to tetravalent glycoclusters: synthesis, structure-activity profiles as lectin inhibitors and impact of combining both valency and headgroup tailoring on selectivity", Organic and Biomolecular Chemistry. 2012, Vol 10, Issue 34, pages 6893-6907.

Kilcoyne M, Gerlach JQ, Kane M, Joshi L, "Surface chemistry and linker effects on lectin-carbohydrate recognition for glycan microarrays" Analytical methods. 2012, Vol 4 Issue 2721-2728.

Yan D, Naughton J, Clyne M and Murphy PV, "Synthesis of bivalent glycoclusters containing GlcNAc as hexasaccharide mimetics.  Bactericidal activity against Helicobacter pylori", Carbohydrate Research. 2012, Vol 360.

Dolan B, Naughton J, Tegtmeyer N, May FEB, Clyne M, "The interaction of Helicobacter pylori with the adherent mucus gel layer secreted by polarized HT29-MTX-E12", PLOS One. 2012, Vol 7, Issue 10, E4730.

Cunningham S, Starr E, Shaw I, Glavin J, Kane M, Joshi L, "Development of a convenient competitive ELISA for the detection of free and protein-bound non-human Gal-α-(1,3)-Gal epitope based on novel highly specific chicken scFvs, Anal Chem, 2012. Epub 2012 Dec 20.

André S, Jarikote DV, Yan D, Vincenz L, Wang GN, Kaltner H, Murphy PV, Gabius HJ, Synthesis of bivalent lactosides and their activity as sensors for differences between lectins in inter- and intrafamily comparisons, Bioorg Med Chem Lett. 2012, Vol 22, Issue 1, pages 313-318.

Hickey RM, "Human milk oligosaccharides and prevention of pathogen adhesion”, 2012, International Dairy Journal, Vol 22, pg 141-146

Hickey RM and Hayes M, "Extraction and characterization of bioactive carbohydrates with health benefits from marine resources: Macro and Micro Algae”, Cyanobacteria and Invertebrates, 2012, Marine Bioactive Compounds: Sources, Characterization and Applications, Chp 6, pag 150-172

2011

Backert, S, Clyne M., ’Pathogenesis of Helicobacter pylori infection’, Helicobacter, 2011, Vol. 16, pp19-25

Carrington SD, Irwin JA, Liu L, Rudd P, Matthews E, Corfield AP. , ’Analysing Mucin Degradation’ Mucins: Methods and Protocols, McGuckin MA and Thornton DJ (eds), Humana Press, 2011, Chp 23, In Press

Campbell MP, Hayes CA, Struwe WB, Wilkins MR, Aoki-Kinoshita KF, Harvey DJ, Rudd PM, Kolarich D, Lisacek F, Karlsson NG, Packer NH., "UniCarbKB: putting the pieces together for glycomics research", Proteomics. 2011 Nov;11(21):4117-21. doi: 10.1002/pmic.201100302. Epub 2011 Sep 19., PMID: 21898825 [PubMed - indexed for MEDLINE]

Hayes CA, Karlsson NG, Struwe WB, Lisacek F, Rudd PM, Packer NH, Campbell MP. ’UniCarb-DB: a database resource for glycomic discovery’ Bioinformatics, 2011, Vol. 27, Issue 9, pp 1343-1344

Hollinger M, Abraha F, Oscarson S., ’Synthesis of mucin O-glycan core structures as their p-nitro- and p-aminophenyl glycosides’ Carbohydrate Research, 2011, Vol. 346, Issue 12, pp 1454-1466

Kilcoyne M, Gerlach JQ, Farrell MP, Bhavanandan VP, Joshi L., ’Periodic acid-Schiff’s reagent assay for carbohydrates in a microtiter plate format’ Analytical Biochemistry, 2011, Vol. 416, Issue 1, pp 18-26.

Lane JA, Mehra RK, Carrington SD, Hickey RM, “Development of biosensor-based assays to identify anti-infective oligosaccharides”, 2011, Anal Biochem. 2010 Nov 24., Vol 410, Issue 2, Pg 200-205

Marino K, Lane JA, Abrahams JL, Struwe WB, Harvey DJ, Marotta M, Hickey RM, Rudd PM., ’Method for milk oligosaccharide profiling by 2-aminobenzamide labelling and hydrophilic interaction chromatography’ Glycobiology, 2011, Vol. 21, Issue 10, pp 1317-30

Moran AP, Gupta A and Joshi L, "Sweet talk: role of host glycosylation in bacterial pathogenesis of the gastrointestinal tract”, 2011, Gut, In press

Oscarson S, Somsák L., "Carbohydrates as ligands: synthetic and biological aspects", Carbohydr Res. 2011 Sep 6;346(12):1357. No abstract available. PMID: 21723436 [PubMed - indexed for MEDLINE]

Svarovsky S, Joshi, L, “Cancer Associated Glycobiomarkers and Detection Technologies – past, present and future”, 2011, Biosensor Series: Biosensors and Cancer, CRC Press, In press

2010

Alemka A, Whelan S, Gough R, Clyne M, Gallagher ME, Carrington SD, Bourke B, "Purified chicken intestinal mucin attenuates Campylobacter jejuni pathogenicity in vitro. 2010 Journal of Medical Microbiology, Vol. 59 Issue 8, Pg 898-903

Alemka A, Clyne M, Shanahan F, Tompkins T, Corcionivoschi N, Bourke B. “Probiotic colonization of the adherent mucus layer of HT29MTXE12 cells attenuates Campylobacter jejuni virulence”, 2010, Infection and Immunity, Vol. 78, Issue 6, Pg 2812-2822

André s, Lahmann M, Gabius HJ, and Oscarson S, “Glycocluster Design for Improved Avidity and Selectivity in Blocking Human Lectin/Plant Toxin Binding to Glycoproteins and Cells”, 2010, Molecular Pharmaceuticals, Vol 7, Issue 6, Pg 2270-2279

Fournière V, Skantz L, Sajtos F, Oscarson S, Lahmann M, “Synthesis of the Lewis b pentasaccharide and HSA-conjugate thereof”, 2010, Tetrahedron, Vol. 66, Issue 39, Pg 7850 (no document found)

Sundgren A, Lahmann M and Oscarson S, “Synthesis of 6-PEtN-a-D-GalpNAc-(1→6)-b-D-Galp-(1→4)-b-D-GlcpNAc-(1→3)-b-D-Galp-(1→4)-b-D-Glcp, a structure found in the outer core of Haemophilus influenzae LPS”, 2010, Beilstein J. Org. Chem., Vol. 6, Issue 1, Pg 80 (no document found)

Nurisso A, Blanchard B, Audfray A, Rydner L, Oscarson S, Varrot A, Imberty A, “Role of water molecule in in structure and energetic of Pseudemonas aeruginosa PA-IL lectin interacting with disaccharides”, 2010, J. Biol. Chem., Vol 285, Issue 26, Pg 203316-29327 (no document found)

Olsson JDM and Oscarson S, “Synthesis of 3,4-Branched Phosphorylated Trisaccharides Corresponding to LPS Inner Core Structure of Neisseria meningitidis and Haemophilus influenza”, 2010, Carbohydr. Res., Vol 345, Issue 10, Pg 1331-1338 (no document found)

Björklund C, Oscarson S, Benkestock K, Borkakoti N, Jansson K, Lindberg J, Hallberg A, Rosenquist Å, and Samuelsson B, “Design and Synthesis of Potent Cathepsin D selective BACE-1 inhibitors”, 2010, J. Med. Chem., Vol 53, Issue 4, Pg 1458-1464

Meredith JA, Wallberg H, Vrang L, Oscarson S, Parkes K, Hallberg A and Samuelsson B, “Design and Synthesis of Novel P2 Substituents in Diol-based HIV Protease Inhibitors”, 2010, Eur. J. Med. Chem., Vol 45, Issue 1, Pg 160-170

Zhao Y, Zhou Y, O’Boyle KM, Murphy PV, “Biological study of novel angiogenesis inhibitor N-(8-(3-ethynylphenoxy)octyl-1-deoxynojirimycin”, 2010, Chemical Biology and Drug Design, Vol 74, Issue 6, Pg 570-577 (no document found)

Jarikote DV, Murphy PV, “Metathesis and macrocycles with embedded carbohydrates”, 2010, European Journal of Organic Chemistry, Issue 26, Pg 4959-4970 (no documents found)

Zhou Y, Murphy PV, “Synthesis of congeners of the migrastatin and dorrigocin A core structures from D-xylose”, 2010, Tetrahedron Letters, Vol 51, Pg 5262-5264 (no documents found)

Pilgrim W, Murphy PV, “SnCl₄ and TiCl₄ catalysed anomerisation of acylated O- and S-glycosides: analysis of factors that lead to higher a:b anomer ratios and reaction rates”, 2010, Journal of Organic Chemistry (Featured Article), Vol 75, Issue 20, Pg 6747-6755 (no documents found)

Napolitano C, McArdle P and Murphy PV, “Access to Resorcylic Acid Lactones via Phosphonate Based Intramolecular Olefination”, 2010, Journal of Organic Chemistry, Pg 7407

Zhao Y, Liu W, Zhou Y, Zhang X and Murphy PV, “N-(8-(3-Ethynylphenoxy)octyl-1-deoxynojirimycin Suppresses Growth and Migration of Human Lung Cancer Cells, 2010, Bioorg. Med. Chem. Lett.  http://dx.doi.org/, Vol 20, Issue 14, Pg 7540-7543

Jarikote DV, O’Reilly C and Murphy PV, “Ultrasound assisted synthesis of C-glycosides”, 2010, Tetrahedron Letters, Vol 51, Issue 51, Pg 6776-6778 (no document found)

Issa S, Moran AP, Ustinov SN, Lin JH, Ligtenberg AJ, Karlsson NG, “O-linked oligosaccharides from salivary agglutinin: Helicobacter pylori binding sialyl-Lewis x and Lewis b are terminating moieties on hyperfucosylated oligo-N-acetyllactosamine”, 2010, Glycobiology, Vol 20, Issue 8, Pg 1046-57

Moran AP, "The role of endotoxin in infection: Helicobacter pylori and Campylobacter jejuni", 2010, Subcell Biochem, Vol 53, Pg 209-240

Tharmalingam T, Mariño K, Rudd PM, "Platform technology to identify potential disease markers and establish heritability and environmental determinants of the human serum N-glycome”, 2010, Carbohydr Res, Vol 345, Issue 10, Pg 1280-2

Mariño K, Bones J, Kattla JJ, Rudd PM, “A systematic approach to protein glycosylation analysis: a path through the maze”, 2010, Nat Chem Biol, Vol 6, Issue 10, Pg 713-723

Lane JA, Mehra RK, Carrington SD and Hickey RM, “Food Glycome: a source of protection against chronic infection in the gastro-intestinal tract”, 2010, International Journal of Food Microbiology, Issue 142, Pg 1-13

Gerlach JQ, Kilcoyne M, McKeown P, Spillane C and Joshi L, “Plant-produced Biopharmaceuticals”, 2010, Transgenic Crop Plants Vol 1. Kole C et al (Eds), Springer Verlag., Pg 269-299

Cunningham S and Joshi L, “Algal Biotechnology: An Emerging Resource with Diverse Application and Potential”, 2010, Transgenic Crop Plants Vol 2. Kole C et al (Eds), Springer Verlag., Pg 343-357

Cunningham S, Gerlach J and Joshi L, Glyco-Biosensors: Properties, materials and applications. In Glycobiology Research Trends, 2010, Glycobiology Research Trends. George Powell and Olivier McCabe (eds), Chp 3

Cunningham S, Gerlach JQ, Kane M, Joshi L., “Glyco-biosensors: Recent advances and applications for the detection of free and bound carbohydrates”, 2010, The Analyst, Vol 135, Issue 10, Pg 2471-80

Gerlach JQ, Cunningham S, Kane M, Joshi L., “Glycobiomimics and Glycobiosensors”, 2010, Biochemical Society Transactions, Vol 38, Issue 5, Pg 1333-36

 

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